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Silent gene clusters encode magnetic organelle biosynthesis in a non-magnetotactic phototrophic bacterium

M. Dziuba , A. Paulus , L. Schramm , R. Awal , M. Pósfai , et al.
ISME Journal, 2023, 17 (3), pp.326-339. ⟨10.1038/s41396-022-01348-y⟩
Journal articles cea-03993880v1

Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations.

Romuald Laso-Jadart , Michael O'Malley , Adam M. Sykulski , Christophe Ambroise , Mohammed-Amin Madoui
BMC Ecology and Evolution, 2023, 23 (1), pp.46. ⟨10.1186/s12862-023-02160-8⟩
Journal articles hal-04215576v1

ŸnFABRE: design of reference populations for genomic selection in Tenebrio molitor

E. Sellem , Armel Donkpegan , Q. Li , K. Paul , A. Masseron , et al.
Book of Abstracts of the 74. Annual Meeting of the European Federation of Animal Science, INRAE, Aug 2023, Lyon, France. pp.620
Conference papers hal-04208076v1
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Tenebrio molitor genomic structure among available populations.

Evangelia Eleftheriou , Benoît Vacherie , Karine Labadie , C.G. Athanassiou , Thierry Rigaud , et al.
WCGALP 2022 12th World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. pp.2549-2551, ⟨10.3920/978-90-8686-940-4_616⟩
Conference papers hal-04196166v1
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Dynamique de la structure des génomes et de leur biogéographie dans l’océan : analyses comparatives des données métagénomiques du projet Tara Oceans pour l’étude de la microalgue Bathycoccus et des communautés planctoniques globales

Thomas Vannier
Sciences agricoles. Université Paris Saclay (COmUE), 2017. Français. ⟨NNT : 2017SACLE002⟩
Theses tel-04191103v1
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Optimization of enzymes via directed evolution in vivo

Tiffany Souterre
Agricultural sciences. Université Paris Saclay (COmUE), 2017. English. ⟨NNT : 2017SACLE016⟩
Theses tel-04190609v1
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Logique paracohérente pour l’annotation fonctionnelle des génomes au travers de réseaux biologiques

Jonathan Mercier
Sciences agricoles. Université Paris Saclay (COmUE), 2017. Français. ⟨NNT : 2017SACLE007⟩
Theses tel-04190606v1
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Etude de la dégradation biologique et chimique d'un pesticide persistant : la chlordécone

Marion Chevallier
Sciences agricoles. Université Paris Saclay (COmUE), 2017. Français. ⟨NNT : 2017SACLE033⟩
Theses tel-04190603v1
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Rôle des protistes hétérotrophes marins dans le cycle du carbone océanique par génomique en cellule unique

Yoann Seeleuthner
Sciences agricoles. Université Paris Saclay (COmUE), 2018. Français. ⟨NNT : 2018SACLE002⟩
Theses tel-04190596v1
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Analyses comparatives des génomes et transcriptomes de deux espèces d’Amoebophrya distinctes en termes d'impact sur l'hôte

Sarah Farhat
Sciences agricoles. Université Paris Saclay (COmUE), 2018. Français. ⟨NNT : 2018SACLE008⟩
Theses tel-04190593v1
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Ocean-wide comparisons of mesopelagic planktonic community structures

Janaina Rigonato , Marko Budinich , Alejandro Murillo , Manoela Brandão , Juan Pierella Karlusich , et al.
ISME Communications, 2023, 3 (1), pp.83. ⟨10.1038/s43705-023-00279-9⟩
Journal articles hal-04184772v1

Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation

Badr Benjelloun , Kevin Leempoel , Frédéric Boyer , Sylvie Stucki , Ian Streeter , et al.
2023
Preprints, Working Papers, ... hal-04186277v1
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The metabolic control of DNA replication: mechanism and function

Panos Soultanas , Laurent Janniere
Open Biology, 2023, 13 (8), pp.230220. ⟨10.1098/rsob.230220⟩
Journal articles hal-04182209v1
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Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals

Alice Rouan , Melanie Pousse , Nadir Djerbi , Barbara Porro , Guillaume Bourdin , et al.
Nature Communications, 2023, 14 (1), pp.3038. ⟨10.1038/s41467-023-38499-1⟩
Journal articles cea-04171809v1
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Diversity of the Pacific Ocean coral reef microbiome

Pierre Galand , Hans-Joachim Ruscheweyh , Guillem Salazar , Corentin Hochart , Nicolas Henry , et al.
Nature Communications, 2023, 14 (1), pp.3039. ⟨10.1038/s41467-023-38500-x⟩
Journal articles hal-04176291v1
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Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean

Corentin Hochart , Lucas Paoli , Hans-Joachim Ruscheweyh , Guillem Salazar , Emilie Boissin , et al.
Nature Communications, 2023, 14 (1), pp.3037. ⟨10.1038/s41467-023-38502-9⟩
Journal articles hal-04176293v1
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Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes

Alex Veglia , Kalia Bistolas , Christian Voolstra , Benjamin Hume , Hans-Joachim Ruscheweyh , et al.
Communications Biology, 2023, 6 (1), pp.566. ⟨10.1038/s42003-023-04917-9⟩
Journal articles hal-04176296v1
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Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Caroline Belser , Julie Poulain , Karine Labadie , Frederick Gavory , Adriana Alberti , et al.
Scientific Data , 2023, 10 (1), pp.326. ⟨10.1038/s41597-023-02204-0⟩
Journal articles hal-04176297v1

Complete Genome Sequences of Two Pseudomonas Species Isolated from Marine Environments of the Pacific Ocean

Shi-Zhen Wang , Corinne Cruaud , Jean-Marc Aury , David Vallenet , Julie Poulain , et al.
Microbiology Resource Announcements, 2021, 10 (16), ⟨10.1128/mra.01062-19⟩
Journal articles hal-04178012v1

Native amine dehydrogenases can catalyze the direct reduction of carbonyl compounds to alcohols in the absence of ammonia

Aurélie Fossey-Jouenne , Laurine Ducrot , Ewald Jongkind , Eddy Elisée , Anne Zaparucha , et al.
Frontiers in Catalysis, 2023, 3, ⟨10.3389/fctls.2023.1105948⟩
Journal articles hal-04178006v1

Biocatalytic Reductive Amination by Native Amine Dehydrogenases to Access Short Chiral Alkyl Amines and Amino Alcohols

Laurine Ducrot , Megan Bennett , Adam Caparco , Julie Champion , Andreas Bommarius , et al.
Frontiers in Catalysis, 2021, 1, ⟨10.3389/fctls.2021.781284⟩
Journal articles hal-04178002v1

Structure and Mutation of the Native Amine Dehydrogenase MATOUAmDH2

Megan Bennett , Laurine Ducrot , Carine Vergne‐vaxelaire , Gideon Grogan
ChemBioChem, 2022, 23 (10), ⟨10.1002/cbic.202200136⟩
Journal articles hal-04177998v1

Synthesis of Chiral Amines via a Bi‐Enzymatic Cascade Using an Ene‐Reductase and Amine Dehydrogenase

Ewald Jongkind , Aurélie Fossey-Jouenne , Ombeline Mayol , Anne Zaparucha , Carine Vergne-Vaxelaire , et al.
ChemCatChem, 2022, 14 (2), ⟨10.1002/cctc.202101576⟩
Journal articles hal-04177991v1

Asymmetric reductive amination by a wild-type amine dehydrogenase from the thermophilic bacteria Petrotoga mobilis

Ombeline Mayol , Sylvain David , Ekaterina Darii , Adrien Debard , Aline Mariage , et al.
Catalysis Science & Technology, 2016, 6 (20), pp.7421-7428. ⟨10.1039/C6CY01625A⟩
Journal articles hal-04177990v1

Disparate genetic divergence patterns in three corals across a pan-Pacific environmental gradient highlight species-specific adaptation

Christian Voolstra , Benjamin Hume , Eric Armstrong , Guinther Mitushasi , Barbara Porro , et al.
npj Biodiversity, 2023, 2 (1), pp.15. ⟨10.1038/s44185-023-00020-8⟩
Journal articles hal-04176277v1

New enzymes and method for preparing hydroxylated L-lysine or L-ornithine and analogs thereof

Anne Zaparucha , Véronique De Berardinis , Pierre-Loïc Saaidi , Damien Baud
France, Patent n° : WO/2015/078889. 2013
Patents hal-04171878v1

METHOD FOR PREPARING AMINES FROM ALDEHYDES AND KETONES BY BIOCATALYSIS

Carine Vergne-Vaxelaire , Véronique de Berardinis , Anne Zaparucha
France, Patent n° : WO/2019/008110. 2018
Patents hal-04171875v1
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Host transcriptomic plasticity and photosymbiotic fidelity underpin $Pocillopora$ acclimatization across thermal regimes in the Pacific Ocean

Eric J Armstrong , Julie Lê-Hoang , Quentin Carradec , Jean-Marc Aury , Benjamin Noel , et al.
Nature Communications, 2023, 14, pp.3056. ⟨10.1038/s41467-023-38610-6⟩
Journal articles cea-04171796v1
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A selective bottleneck during host entry drives the evolution of new legume symbionts

Ginaini Grazielli Doin de Moura , Saida Mouffok , Nil Gaudu , Anne-Claire Cazalé , Marine Milhes , et al.
Molecular Biology and Evolution, 2023, 40 (5), pp.msad116. ⟨10.1093/molbev/msad116⟩
Journal articles hal-03811656v1

Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach

Lucille Stuani , Christophe Lechaplais , Aaro Salminen , Béatrice Ségurens , Maxime Durot , et al.
Metabolomics, 2014, 10 (6), pp.1223-1238. ⟨10.1007/s11306-014-0662-x⟩
Journal articles hal-04167345v1